CDS

Accession Number TCMCG057C46073
gbkey CDS
Protein Id XP_018447841.1
Location complement(join(19223557..19224219,19225389..19225761,19226380..19226501,19226694..19227116))
Gene LOC108819326
GeneID 108819326
Organism Raphanus sativus

Protein

Length 526aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018592339.1
Definition PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category GMW
Description macromolecule glycosylation
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01003        [VIEW IN KEGG]
KEGG_ko ko:K18789        [VIEW IN KEGG]
EC 2.4.2.41        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000139        [VIEW IN EMBL-EBI]
GO:0000271        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008194        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010393        [VIEW IN EMBL-EBI]
GO:0010398        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016051        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016757        [VIEW IN EMBL-EBI]
GO:0016763        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0035252        [VIEW IN EMBL-EBI]
GO:0042285        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045488        [VIEW IN EMBL-EBI]
GO:0045489        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAGCTCCAAGATCAAGAAGATGCTTTCTTTCTCTGTTAACCCTTTTTTCAATCTCTCTTATTCTGTTTTCTTTTTTACTTTTTGTATACACAAAGCCCTCTAATAAGCCTTTCATAGATTACAAAAACCAATTTTCTGTCTCTTTATCATTTCTTGCTCCTCCTCTGTCTCTTCTCGAACAAAACAACTCAACAAACAGTACCCTTGATTCAGTCTCTAGTCCTCCTCCTATGTCTCTTCTCAGACAAAACAACACAACAAACACTACTCTTGCTTCAATCTCTTCTCCTCCTCCTCCTCTCAGACAAAGCAACACAACAAACTCAACACTTGCTTCAGTCTCTTTTACTTCTCCTCTCTCTGATCAAGATAACCAAAAAAAGTCTTCAAATCCTACAAGTAAAACAACTTTTATCAGGAAGAGAAGTAGGTTGAACAAAGTAGAAGCAGATTTAGCGAAAGCAAGAGCAGCAATTAAGAGGGCAGCTTCTACACAAAACTATAGCAGCTCTCTCTACAAGAACCCAGCCGCCTTTCACCAGAGTCACACGGAAATGATGAATCGTTTTAAGGTGTGGACATACACCGAGGGAGAGGCCCCACTGTTCCATGACGGCCCTGTTAATGACATTTACGGTATAGAAGGCCAGTTCATGGACGAAATGTGCGTAGAGGGCCCTATGAGGAGCCATTTTCGGGCAGATCACCCTGATGATGCTCACGTTTATTTCGTTCCATTTAGCGTCGCCAAGGTCATCCACTTTGTCTACAAGCCCATAACCTCTGTCGAAGAGTTTTCGCGGGCTCGCCTACACCGCCTTATAGAGGATTATGTTTATGTTGTTGCTACTAAGTATCCCTTTTGGAACAGAAGCCGTGGAGGTGACCATTTCATGGTATCATGCCATGACTGGGCACCAGACGTGATCGATGGAAACCCAAAGTTGTTCGAAAGGTTCATAAGGGGACTTTGCAATGCTAACACCTCAGAAGGATTCAGGCCGAACCTAGATGTATCCATTCCGGAGATCTATCTTCCTAAAGGTAAACTAGGTCCCTCTTTCCTCGGGAAGTCACCGAGAGTTCGATCTATACTAGCATTTTTCGCGGGAAGAACACACGGTAATATCCGAAAAATCTTATTTCAACATTGGAAAGAAAAGGACAGTCAAGTACAAGTGTATGAGCGTCTTCCTCCGGGTAAAGATTATACAACACTAATGGGGATGAGCAAGTTTTGTCTATGCCCGAGTGGTTGGGAGGTCGCTAGCCCAAGGGAGGTCGAGGCTATATACGCTGGTTGTGTACCTGTGATCATATCCGATAACTATTCATTACCATTCAGTGATGTCCTTAATTGGGACTCCTTTTCCATACAAATCCCTGTTTCTAGGATAAGTGAGATCAAAACGATTCTAGAGAGTGTCTCTCTTGTTAGATACTTGAAGATGTATAAGAGAGTCTTAGAAGTCAAGCGGCATTTCGTGTTGAACCGTCCAGCTCAGCCCTACGACGTGATGCATATGATGCTTCACTCTATCTGGTTAAGAAGACTTAACCTTAGGCTTACTGCATAA
Protein:  
MAAPRSRRCFLSLLTLFSISLILFSFLLFVYTKPSNKPFIDYKNQFSVSLSFLAPPLSLLEQNNSTNSTLDSVSSPPPMSLLRQNNTTNTTLASISSPPPPLRQSNTTNSTLASVSFTSPLSDQDNQKKSSNPTSKTTFIRKRSRLNKVEADLAKARAAIKRAASTQNYSSSLYKNPAAFHQSHTEMMNRFKVWTYTEGEAPLFHDGPVNDIYGIEGQFMDEMCVEGPMRSHFRADHPDDAHVYFVPFSVAKVIHFVYKPITSVEEFSRARLHRLIEDYVYVVATKYPFWNRSRGGDHFMVSCHDWAPDVIDGNPKLFERFIRGLCNANTSEGFRPNLDVSIPEIYLPKGKLGPSFLGKSPRVRSILAFFAGRTHGNIRKILFQHWKEKDSQVQVYERLPPGKDYTTLMGMSKFCLCPSGWEVASPREVEAIYAGCVPVIISDNYSLPFSDVLNWDSFSIQIPVSRISEIKTILESVSLVRYLKMYKRVLEVKRHFVLNRPAQPYDVMHMMLHSIWLRRLNLRLTA